BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014B05SP1|AL426642
(793 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1542 1572 0.0
>3x_Contig1542
Length = 13810
Score = 1572 bits (793), Expect = 0.0
Identities = 793/793 (100%)
Strand = Plus / Plus
Query: 1 agacttttgacttacataccacagcatattctgactcagtggcactattgatttcaaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4222 agacttttgacttacataccacagcatattctgactcagtggcactattgatttcaaata 4281
Query: 61 taagctcatcactaggtcatgctacagcggcagagaagaaacttagtctgaaaaagagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4282 taagctcatcactaggtcatgctacagcggcagagaagaaacttagtctgaaaaagagac 4341
Query: 121 aagtttcagaagagtcatcaaagtttgttaaattgacaattatattcctttgcatttatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4342 aagtttcagaagagtcatcaaagtttgttaaattgacaattatattcctttgcatttatc 4401
Query: 181 caatgcaagtaataggctgggtaattcttgaatggttttcgcacgccataaggcgagaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4402 caatgcaagtaataggctgggtaattcttgaatggttttcgcacgccataaggcgagaca 4461
Query: 241 tgatccttggcaccttagattgtcaacttttagaaatggaggataaaaaaaccactttgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4462 tgatccttggcaccttagattgtcaacttttagaaatggaggataaaaaaaccactttgc 4521
Query: 301 agcgatatgatgattggaaacctaggttatcgaaactctgtgagtctgtgcagaatccct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4522 agcgatatgatgattggaaacctaggttatcgaaactctgtgagtctgtgcagaatccct 4581
Query: 361 tcacagttcaaagtgctacggcattgcttaaaattggagatcatatgtggctgagaagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4582 tcacagttcaaagtgctacggcattgcttaaaattggagatcatatgtggctgagaagaa 4641
Query: 421 aacaaaatagcgactatcccacagatgtccaatgtaatcggaccaccgctaagaaagtcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4642 aacaaaatagcgactatcccacagatgtccaatgtaatcggaccaccgctaagaaagtcg 4701
Query: 481 gtaaattgacctggtggttttacaactcctgtgcttatcagctatatttcctgttattaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4702 gtaaattgacctggtggttttacaactcctgtgcttatcagctatatttcctgttattaa 4761
Query: 541 ttttgatgacatgggttgtaatatcttccacaattcccgcttcgtactcgacatcactgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4762 ttttgatgacatgggttgtaatatcttccacaattcccgcttcgtactcgacatcactgt 4821
Query: 601 caaaaagggcagttgagctaagctcttcagcaacatatatcccaaccaattcaattggta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4822 caaaaagggcagttgagctaagctcttcagcaacatatatcccaaccaattcaattggta 4881
Query: 661 aattgtgcgaatcttttgataccgaaataaatacgaacattgaagaattggtaagaaact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4882 aattgtgcgaatcttttgataccgaaataaatacgaacattgaagaattggtaagaaact 4941
Query: 721 tctataacacgtcaattaatcaatcattggagaaatataatgacaaaatgactgcacttg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4942 tctataacacgtcaattaatcaatcattggagaaatataatgacaaaatgactgcacttg 5001
Query: 781 taacgaaacttcc 793
|||||||||||||
Sbjct: 5002 taacgaaacttcc 5014
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6096
Number of Sequences: 1807
Number of extensions: 6096
Number of successful extensions: 32
Number of sequences better than 1.0e-20: 1
length of query: 793
length of database: 10,358,551
effective HSP length: 16
effective length of query: 777
effective length of database: 10,329,639
effective search space: 8026129503
effective search space used: 8026129503
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)